Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01839 | Not Available | - | 2106938 - 2108374 | 53494.3 |
| methionyl-trna synthetase | HMPREF1064_01840 | Not Available | - | 2108456 - 2110498 | 77813.0 |
| radical sam additional 4fe4s-binding domain-containing protein | HMPREF1064_01841 | Not Available | + | 2110731 - 2111813 | 41750.3 |
| hypothetical protein | HMPREF1064_01842 | Not Available | + | 2111825 - 2112304 | 17978.4 |
| hypothetical protein | HMPREF1064_01843 | Not Available | + | 2112336 - 2112824 | 18427.7 |
| hypothetical protein | HMPREF1064_01844 | Not Available | + | 2112879 - 2113046 | 6558.68 |
| mg chelatase-like protein | HMPREF1064_01845 | Not Available | - | 2113048 - 2114586 | 56266.9 |
| hypothetical protein | HMPREF1064_01846 | Not Available | - | 2114591 - 2115658 | 40619.2 |
| hypothetical protein | HMPREF1064_01847 | Not Available | - | 2115811 - 2117487 | 60891.9 |
| tyrosine recombinase xerd | HMPREF1064_01848 | Not Available | - | 2117645 - 2118571 | 35676.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
