Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mta/sah nucleosidase | HMPREF1064_01829 | Not Available | - | 2095375 - 2096070 | 25504.5 |
| hypothetical protein | HMPREF1064_01830 | Not Available | + | 2096155 - 2098647 | 93094.6 |
| hypothetical protein | HMPREF1064_01831 | Not Available | - | 2098674 - 2099420 | 28664.4 |
| hypothetical protein | HMPREF1064_01832 | Not Available | - | 2099413 - 2100675 | 47725.6 |
| hypothetical protein | HMPREF1064_01833 | Not Available | - | 2100688 - 2101803 | 42777.2 |
| hypothetical protein | HMPREF1064_01834 | Not Available | - | 2101776 - 2102792 | 40484.6 |
| hypothetical protein | HMPREF1064_01835 | Not Available | - | 2102789 - 2103604 | 31469.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF1064_01836 | Not Available | - | 2103601 - 2104968 | 50844.2 |
| hypothetical protein | HMPREF1064_01837 | Not Available | + | 2105060 - 2105890 | 31943.4 |
| hypothetical protein | HMPREF1064_01838 | Not Available | - | 2105913 - 2106938 | 39456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
