Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01809 | Not Available | + | 2071109 - 2072113 | 36538.8 |
| uracil phosphoribosyltransferase | HMPREF1064_01810 | Not Available | - | 2072273 - 2072932 | 24465.6 |
| phosphoenolpyruvate carboxykinase | HMPREF1064_01811 | Not Available | + | 2073193 - 2074800 | 59076.1 |
| hypothetical protein | HMPREF1064_01812 | Not Available | + | 2074926 - 2075558 | 23144.1 |
| gtp-binding protein typa/bipa | HMPREF1064_01813 | Not Available | - | 2075620 - 2077422 | 67347.3 |
| hypothetical protein | HMPREF1064_01814 | Not Available | - | 2077489 - 2081610 | 157539.0 |
| hypothetical protein | HMPREF1064_01815 | Not Available | - | 2081961 - 2082566 | 22871.3 |
| hypothetical protein | HMPREF1064_01816 | Not Available | + | 2083003 - 2083572 | 21821.6 |
| hypothetical protein | HMPREF1064_01817 | Not Available | + | 2083585 - 2085045 | 54352.7 |
| hypothetical protein | HMPREF1064_01818 | Not Available | + | 2085928 - 2086524 | 20610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
