Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01800 | Not Available | + | 2057003 - 2057680 | 25391.6 |
| hypothetical protein | HMPREF1064_01801 | Not Available | + | 2057661 - 2058554 | 33946.6 |
| hypothetical protein | HMPREF1064_01802 | Not Available | + | 2058558 - 2059637 | 40431.1 |
| hypothetical protein | HMPREF1064_01803 | Not Available | + | 2059664 - 2061751 | 78978.4 |
| protein-export membrane protein secd | HMPREF1064_01804 | Not Available | + | 2061930 - 2064917 | 109218.0 |
| hypothetical protein | HMPREF1064_01805 | Not Available | - | 2065164 - 2066228 | 38894.4 |
| hypothetical protein | HMPREF1064_01806 | Not Available | - | 2066372 - 2067325 | 35313.3 |
| 2-amino-3-ketobutyrate coenzyme a ligase | HMPREF1064_01807 | Not Available | + | 2067496 - 2068686 | 43601.5 |
| Trna-arg | Not Available | Not Available | + | 2068753 - 2068827 | Not Available |
| 2-oxoacid:acceptor oxidoreductase, alpha subunit | HMPREF1064_01808 | Not Available | + | 2069238 - 2071085 | 66255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
