Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01790 | Not Available | - | 2034756 - 2037965 | 119134.0 |
| hypothetical protein | HMPREF1064_01791 | Not Available | - | 2038397 - 2040325 | 72994.6 |
| hypothetical protein | HMPREF1064_01792 | Not Available | - | 2040458 - 2044684 | 161517.0 |
| hypothetical protein | HMPREF1064_01793 | Not Available | + | 2044954 - 2046489 | 57597.0 |
| hypothetical protein | HMPREF1064_01794 | Not Available | + | 2046513 - 2048492 | 75441.3 |
| hypothetical protein | HMPREF1064_01795 | Not Available | - | 2049295 - 2050857 | 57680.4 |
| pp_01796 | HMPREF1064_01796 | Not Available | - | 2051005 - 2052060 | Not Available |
| hypothetical protein | HMPREF1064_01797 | Not Available | - | 2052063 - 2052926 | 33226.0 |
| hypothetical protein | HMPREF1064_01798 | Not Available | - | 2053098 - 2056427 | 126039.0 |
| hypothetical protein | HMPREF1064_01799 | Not Available | - | 2056520 - 2056792 | 9278.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
