Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01730 | Not Available | - | 1952250 - 1953215 | 36369.2 |
| hypothetical protein | HMPREF1064_01731 | Not Available | - | 1953222 - 1955876 | 100790.0 |
| hypothetical protein | HMPREF1064_01732 | Not Available | - | 1955873 - 1956676 | 30898.8 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_01733 | Not Available | - | 1956746 - 1957255 | 19927.8 |
| hypothetical protein | HMPREF1064_01734 | Not Available | - | 1958143 - 1959852 | 62920.2 |
| hypothetical protein | HMPREF1064_01735 | Not Available | - | 1959879 - 1960862 | 35475.6 |
| hypothetical protein | HMPREF1064_01736 | Not Available | - | 1960946 - 1962172 | 45106.6 |
| hypothetical protein | HMPREF1064_01737 | Not Available | - | 1962224 - 1963150 | 33990.8 |
| hypothetical protein | HMPREF1064_01738 | Not Available | - | 1963147 - 1964013 | 32940.9 |
| hypothetical protein | HMPREF1064_01739 | Not Available | - | 1964554 - 1966257 | 63134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
