Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | HMPREF1064_01670 | Not Available | + | 1875470 - 1876810 | 47693.8 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HMPREF1064_01671 | Not Available | + | 1876810 - 1878210 | 52348.7 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 1 | HMPREF1064_01672 | Not Available | + | 1878381 - 1879223 | 31652.6 |
| hypothetical protein | HMPREF1064_01673 | Not Available | + | 1879260 - 1880063 | 28590.5 |
| hypothetical protein | HMPREF1064_01674 | Not Available | + | 1880160 - 1881332 | 43033.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01675 | Not Available | + | 1881491 - 1884547 | 112618.0 |
| hypothetical protein | HMPREF1064_01676 | Not Available | + | 1884554 - 1886077 | 57193.0 |
| hypothetical protein | HMPREF1064_01677 | Not Available | + | 1886159 - 1888474 | 84675.7 |
| hypothetical protein | HMPREF1064_01678 | Not Available | + | 1888492 - 1889850 | 50967.4 |
| hypothetical protein | HMPREF1064_01679 | Not Available | - | 1889874 - 1890485 | 24599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
