Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01660 | Not Available | + | 1860288 - 1860464 | 6936.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01661 | Not Available | + | 1860550 - 1863885 | 122693.0 |
| hypothetical protein | HMPREF1064_01662 | Not Available | + | 1863898 - 1865937 | 76726.5 |
| hypothetical protein | HMPREF1064_01663 | Not Available | + | 1865957 - 1868266 | 86355.0 |
| pectate lyase | HMPREF1064_01664 | Not Available | + | 1868535 - 1870676 | 81743.4 |
| hypothetical protein | HMPREF1064_01665 | Not Available | + | 1870693 - 1872063 | 51876.2 |
| l-aspartate oxidase | HMPREF1064_01666 | Not Available | - | 1872255 - 1873835 | 59025.6 |
| hypothetical protein | HMPREF1064_01667 | Not Available | + | 1873991 - 1874551 | 21549.0 |
| hypothetical protein | HMPREF1064_01668 | Not Available | + | 1874627 - 1875037 | 15536.7 |
| hypothetical protein | HMPREF1064_01669 | Not Available | + | 1875041 - 1875454 | 15656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
