Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01590 | Not Available | - | 1765575 - 1765976 | 15053.2 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | HMPREF1064_01591 | Not Available | - | 1765976 - 1767346 | 51892.9 |
| hypothetical protein | HMPREF1064_01592 | Not Available | + | 1767684 - 1768034 | 13223.3 |
| succinate coa transferase | HMPREF1064_01593 | Not Available | + | 1768073 - 1769566 | 53970.6 |
| hypothetical protein | HMPREF1064_01594 | Not Available | + | 1769751 - 1772345 | 96115.1 |
| hypothetical protein | HMPREF1064_01595 | Not Available | - | 1772434 - 1774026 | 59320.6 |
| hypothetical protein | HMPREF1064_01596 | Not Available | - | 1774283 - 1775809 | 57773.4 |
| hypothetical protein | HMPREF1064_01597 | Not Available | - | 1775920 - 1777341 | 52951.9 |
| hypothetical protein | HMPREF1064_01598 | Not Available | - | 1777436 - 1779358 | 73144.0 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01599 | Not Available | - | 1779380 - 1782907 | 131593.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
