Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01541 | Not Available | - | 1710366 - 1711034 | 25614.8 |
| hypothetical protein | HMPREF1064_01542 | Not Available | - | 1711223 - 1712890 | 64183.6 |
| hypothetical protein | HMPREF1064_01543 | Not Available | - | 1712933 - 1713520 | 22038.4 |
| hypothetical protein | HMPREF1064_01544 | Not Available | + | 1713573 - 1713764 | 6929.74 |
| hypothetical protein | HMPREF1064_01545 | Not Available | - | 1713727 - 1715706 | 75397.1 |
| dna mismatch repair protein muts | HMPREF1064_01546 | Not Available | - | 1715756 - 1718368 | 97908.5 |
| hypothetical protein | HMPREF1064_01547 | Not Available | + | 1718487 - 1718993 | 19571.5 |
| hypothetical protein | HMPREF1064_01548 | Not Available | - | 1719188 - 1722520 | 124191.0 |
| hypothetical protein | HMPREF1064_01549 | Not Available | - | 1722540 - 1723787 | 46150.1 |
| hypothetical protein | HMPREF1064_01550 | Not Available | - | 1723784 - 1724755 | 36471.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
