Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01511 | Not Available | - | 1676282 - 1677220 | 36144.6 |
| hypothetical protein | HMPREF1064_01512 | Not Available | + | 1677428 - 1678447 | 38879.8 |
| hypothetical protein | HMPREF1064_01513 | Not Available | + | 1678450 - 1679247 | 29193.2 |
| hypothetical protein | HMPREF1064_01514 | Not Available | - | 1679369 - 1680004 | 23829.5 |
| hypothetical protein | HMPREF1064_01515 | Not Available | + | 1680610 - 1681842 | 44232.3 |
| hypothetical protein | HMPREF1064_01516 | Not Available | - | 1681828 - 1683180 | 51795.6 |
| hypothetical protein | HMPREF1064_01517 | Not Available | - | 1683225 - 1683899 | 25755.4 |
| czca family heavy metal efflux pump | HMPREF1064_01518 | Not Available | - | 1683939 - 1687064 | 115226.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1064_01519 | Not Available | - | 1687074 - 1688171 | 40732.5 |
| hypothetical protein | HMPREF1064_01520 | Not Available | - | 1688196 - 1689449 | 48055.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
