Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybgc/ybaw family acyl-coa thioester hydrolase | HMPREF1064_01481 | Not Available | + | 1644014 - 1644421 | 15671.8 |
| dna protecting protein dpra | HMPREF1064_01482 | Not Available | + | 1644418 - 1645533 | 41080.6 |
| hypothetical protein | HMPREF1064_01483 | Not Available | - | 1645614 - 1647497 | 70737.1 |
| hypothetical protein | HMPREF1064_01484 | Not Available | + | 1647713 - 1648093 | 15505.9 |
| hypothetical protein | HMPREF1064_01485 | Not Available | + | 1648103 - 1649248 | 43731.7 |
| hypothetical protein | HMPREF1064_01486 | Not Available | + | 1649273 - 1649577 | 11587.0 |
| hypothetical protein | HMPREF1064_01487 | Not Available | + | 1649578 - 1650242 | 25802.6 |
| hypothetical protein | HMPREF1064_01488 | Not Available | + | 1650580 - 1650912 | 12667.2 |
| hypothetical protein | HMPREF1064_01489 | Not Available | + | 1650879 - 1651880 | 36494.1 |
| hypothetical protein | HMPREF1064_01490 | Not Available | + | 1651927 - 1652916 | 35834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
