Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family protein | HMPREF1064_01461 | Not Available | - | 1612298 - 1612834 | 19870.1 |
| hypothetical protein | HMPREF1064_01462 | Not Available | + | 1612903 - 1614156 | 47793.9 |
| hypothetical protein | HMPREF1064_01463 | Not Available | + | 1614255 - 1616711 | 92205.4 |
| hypothetical protein | HMPREF1064_01464 | Not Available | + | 1616919 - 1620812 | 148849.0 |
| hypothetical protein | HMPREF1064_01465 | Not Available | - | 1620863 - 1622437 | 61163.8 |
| hypothetical protein | HMPREF1064_01466 | Not Available | - | 1622461 - 1624323 | 70110.8 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01467 | Not Available | - | 1624328 - 1627549 | 118880.0 |
| mannonate dehydratase | HMPREF1064_01468 | Not Available | - | 1627765 - 1628940 | 44572.7 |
| hypothetical protein | HMPREF1064_01469 | Not Available | - | 1628980 - 1629792 | 28669.7 |
| hypothetical protein | HMPREF1064_01470 | Not Available | - | 1629797 - 1630453 | 25587.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
