Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01431 | Not Available | + | 1571455 - 1573329 | 70681.2 |
| hypothetical protein | HMPREF1064_01432 | Not Available | - | 1573620 - 1575746 | 80074.8 |
| tigr00341 family protein | HMPREF1064_01433 | Not Available | - | 1575751 - 1577115 | 50791.7 |
| hypothetical protein | HMPREF1064_01434 | Not Available | - | 1577118 - 1578563 | 54399.0 |
| holliday junction atp-dependent dna helicase ruvb | HMPREF1064_01435 | Not Available | - | 1578567 - 1579622 | 39143.1 |
| hypothetical protein | HMPREF1064_01436 | Not Available | + | 1579722 - 1580840 | 43254.0 |
| hypothetical protein | HMPREF1064_01437 | Not Available | + | 1580854 - 1580952 | 3799.76 |
| hypothetical protein | HMPREF1064_01438 | Not Available | + | 1581246 - 1583846 | 91027.3 |
| hypothetical protein | HMPREF1064_01439 | Not Available | - | 1584140 - 1585255 | 41920.7 |
| hypothetical protein | HMPREF1064_01440 | Not Available | - | 1585203 - 1585304 | 3989.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
