Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01412 | Not Available | - | 1554472 - 1555428 | 36476.2 |
| hypothetical protein | HMPREF1064_01413 | Not Available | - | 1555433 - 1556236 | 31182.4 |
| hypothetical protein | HMPREF1064_01414 | Not Available | - | 1556314 - 1557171 | 33104.5 |
| hypothetical protein | HMPREF1064_01415 | Not Available | - | 1557183 - 1557587 | 15840.0 |
| Trna-met | Not Available | Not Available | + | 1557726 - 1557802 | Not Available |
| calcium-translocating p-type atpase, pmca-type | HMPREF1064_01416 | Not Available | + | 1557959 - 1560589 | 96989.8 |
| had hydrolase, family ia | HMPREF1064_01417 | Not Available | + | 1560617 - 1561231 | 24017.6 |
| riboflavin biosynthesis protein ribf | HMPREF1064_01418 | Not Available | + | 1561231 - 1562151 | 35204.3 |
| hypothetical protein | HMPREF1064_01419 | Not Available | - | 1562176 - 1562271 | 3737.52 |
| hypothetical protein | HMPREF1064_01420 | Not Available | + | 1562437 - 1562859 | 16112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
