Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01383 | Not Available | - | 1532995 - 1534179 | 43757.0 |
| hypothetical protein | HMPREF1064_01384 | Not Available | - | 1534183 - 1534848 | 25316.8 |
| hypothetical protein | HMPREF1064_01385 | Not Available | - | 1534872 - 1535219 | 13146.2 |
| thioredoxin | HMPREF1064_01386 | Not Available | - | 1535258 - 1535737 | 17790.7 |
| hypothetical protein | HMPREF1064_01387 | Not Available | - | 1535740 - 1535958 | 7992.84 |
| hypothetical protein | HMPREF1064_01388 | Not Available | + | 1536349 - 1536963 | 23155.3 |
| hypothetical protein | HMPREF1064_01389 | Not Available | + | 1536975 - 1537472 | 18657.8 |
| hypothetical protein | HMPREF1064_01390 | Not Available | - | 1537617 - 1538915 | 49714.4 |
| hypothetical protein | HMPREF1064_01391 | Not Available | - | 1539394 - 1539528 | 5341.53 |
| higa family addiction module antidote protein | HMPREF1064_01392 | Not Available | - | 1539538 - 1540653 | 43375.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
