Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01373 | Not Available | + | 1520653 - 1521051 | 15244.2 |
| hypothetical protein | HMPREF1064_01374 | Not Available | + | 1521889 - 1523139 | 48148.3 |
| butyrate kinase | HMPREF1064_01375 | Not Available | - | 1523277 - 1524341 | 38457.6 |
| hypothetical protein | HMPREF1064_01376 | Not Available | - | 1524354 - 1525262 | 33274.2 |
| hypothetical protein | HMPREF1064_01377 | Not Available | + | 1525345 - 1527102 | 65065.4 |
| hypothetical protein | HMPREF1064_01378 | Not Available | + | 1527167 - 1528171 | 37735.6 |
| hypothetical protein | HMPREF1064_01379 | Not Available | + | 1528183 - 1528611 | 16112.5 |
| hypothetical protein | HMPREF1064_01380 | Not Available | - | 1528648 - 1530720 | 79274.8 |
| hypothetical protein | HMPREF1064_01381 | Not Available | + | 1530772 - 1532310 | 59330.3 |
| hypothetical protein | HMPREF1064_01382 | Not Available | + | 1532315 - 1532998 | 26125.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
