Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01293 | Not Available | - | 1458392 - 1459096 | 27250.4 |
| hypothetical protein | HMPREF1064_01294 | Not Available | + | 1459203 - 1459934 | 25877.4 |
| hypothetical protein | HMPREF1064_01295 | Not Available | - | 1460132 - 1460605 | 18208.8 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_01296 | Not Available | - | 1460595 - 1461104 | 20171.2 |
| acetylglutamate kinase | HMPREF1064_01297 | Not Available | - | 1461167 - 1461940 | 27055.0 |
| biosynthetic arginine decarboxylase | HMPREF1064_01298 | Not Available | - | 1461945 - 1463837 | 71492.0 |
| shikimate kinase | HMPREF1064_01299 | Not Available | - | 1463878 - 1464405 | 20411.6 |
| dna topoisomerase i | HMPREF1064_01300 | Not Available | - | 1464402 - 1466840 | 91384.3 |
| hypothetical protein | HMPREF1064_01301 | Not Available | - | 1466962 - 1468659 | 64425.9 |
| hypothetical protein | HMPREF1064_01302 | Not Available | - | 1468683 - 1471565 | 110315.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
