Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01253 | Not Available | + | 1408331 - 1410412 | 78010.0 |
| hypothetical protein | HMPREF1064_01254 | Not Available | + | 1410426 - 1411568 | 43106.1 |
| hypothetical protein | HMPREF1064_01255 | Not Available | - | 1411655 - 1412635 | 35171.8 |
| hypothetical protein | HMPREF1064_01256 | Not Available | - | 1412658 - 1414514 | 67156.9 |
| hypothetical protein | HMPREF1064_01257 | Not Available | - | 1414782 - 1415969 | 44539.0 |
| hypothetical protein | HMPREF1064_01258 | Not Available | - | 1416037 - 1416618 | 22154.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | HMPREF1064_01259 | Not Available | - | 1416721 - 1418235 | 55836.0 |
| hypothetical protein | HMPREF1064_01260 | Not Available | + | 1418684 - 1419664 | 38083.7 |
| l-fucose isomerase | HMPREF1064_01261 | Not Available | + | 1419686 - 1421461 | 65624.0 |
| l-fucose:h+ symporter permease | HMPREF1064_01262 | Not Available | + | 1421912 - 1423078 | 42938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
