Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase, b subunit | HMPREF1064_01233 | Not Available | + | 1377448 - 1379412 | 72970.4 |
| hypothetical protein | HMPREF1064_01234 | Not Available | - | 1379508 - 1379651 | 5507.81 |
| 4-alpha-glucanotransferase | HMPREF1064_01235 | Not Available | + | 1379740 - 1382418 | 104546.0 |
| hypothetical protein | HMPREF1064_01236 | Not Available | + | 1382492 - 1383847 | 49116.3 |
| hypothetical protein | HMPREF1064_01237 | Not Available | + | 1384553 - 1385038 | 18959.0 |
| hypothetical protein | HMPREF1064_01238 | Not Available | + | 1385111 - 1387822 | 98612.3 |
| hypothetical protein | HMPREF1064_01239 | Not Available | + | 1388071 - 1388262 | 7560.98 |
| hypothetical protein | HMPREF1064_01240 | Not Available | - | 1388380 - 1389975 | 62645.9 |
| hypothetical protein | HMPREF1064_01241 | Not Available | - | 1389977 - 1390126 | 5919.37 |
| hypothetical protein | HMPREF1064_01242 | Not Available | + | 1390224 - 1392074 | 70753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
