Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | HMPREF1064_01224 | Not Available | + | 1368526 - 1369656 | 40637.7 |
| udp-n-acetylmuramate-l-alanine ligase | HMPREF1064_01225 | Not Available | + | 1369646 - 1371022 | 51100.3 |
| hypothetical protein | HMPREF1064_01226 | Not Available | + | 1371019 - 1371756 | 27862.3 |
| cell division protein ftsa | HMPREF1064_01227 | Not Available | + | 1371760 - 1373271 | 55252.2 |
| cell division protein ftsz | HMPREF1064_01228 | Not Available | + | 1373309 - 1374613 | 47967.0 |
| hypothetical protein | HMPREF1064_01229 | Not Available | + | 1374635 - 1375084 | 16022.5 |
| hypothetical protein | HMPREF1064_01230 | Not Available | - | 1375354 - 1375509 | 5801.42 |
| dna repair protein reco | HMPREF1064_01231 | Not Available | - | 1375665 - 1376390 | 28598.7 |
| Trna-glu | Not Available | Not Available | + | 1376634 - 1376708 | Not Available |
| 30s ribosomal protein s20 | HMPREF1064_01232 | Not Available | + | 1376748 - 1377002 | 9698.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
