Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | HMPREF1064_01204 | Not Available | + | 1344601 - 1345110 | 17729.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | HMPREF1064_01205 | Not Available | + | 1345191 - 1347035 | 68277.7 |
| glutaminase a | HMPREF1064_01206 | Not Available | + | 1347049 - 1347963 | 34114.0 |
| hypothetical protein | HMPREF1064_01207 | Not Available | - | 1348687 - 1349055 | 13087.2 |
| hypothetical protein | HMPREF1064_01208 | Not Available | - | 1349400 - 1350770 | 50690.3 |
| hypothetical protein | HMPREF1064_01209 | Not Available | - | 1350755 - 1352089 | 50763.2 |
| hypothetical protein | HMPREF1064_01210 | Not Available | - | 1352089 - 1352922 | 31472.2 |
| hypothetical protein | HMPREF1064_01211 | Not Available | - | 1352919 - 1354727 | 69707.2 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | HMPREF1064_01212 | Not Available | - | 1354737 - 1355171 | 15780.1 |
| hypothetical protein | HMPREF1064_01213 | Not Available | + | 1355431 - 1356723 | 48663.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
