Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01194 | Not Available | - | 1331452 - 1333143 | 63482.5 |
| hypothetical protein | HMPREF1064_01195 | Not Available | - | 1333287 - 1334978 | 62845.7 |
| hypothetical protein | HMPREF1064_01196 | Not Available | + | 1335069 - 1336733 | 64257.2 |
| hypothetical protein | HMPREF1064_01197 | Not Available | - | 1336797 - 1336970 | 6442.0 |
| pyruvate formate-lyase | HMPREF1064_01198 | Not Available | + | 1337100 - 1339460 | 89608.6 |
| glycyl-radical enzyme activating protein family | HMPREF1064_01199 | Not Available | + | 1339465 - 1340373 | 33607.1 |
| hypothetical protein | HMPREF1064_01200 | Not Available | - | 1340425 - 1341798 | 51389.0 |
| rna polymerase sigma-54 factor | HMPREF1064_01201 | Not Available | + | 1341927 - 1343396 | 56188.2 |
| hypothetical protein | HMPREF1064_01202 | Not Available | + | 1343401 - 1344057 | 24865.9 |
| glycine cleavage system h protein | HMPREF1064_01203 | Not Available | + | 1344094 - 1344474 | 14195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
