Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01184 | Not Available | - | 1322709 - 1323116 | 15056.2 |
| transcription elongation factor grea | HMPREF1064_01185 | Not Available | - | 1323169 - 1323633 | 16808.5 |
| hypothetical protein | HMPREF1064_01186 | Not Available | - | 1323834 - 1324982 | 43048.5 |
| polyribonucleotide nucleotidyltransferase | HMPREF1064_01187 | Not Available | + | 1325147 - 1327333 | 80734.4 |
| rubredoxin | HMPREF1064_01188 | Not Available | - | 1327516 - 1327680 | 5868.75 |
| nad-dependent deacetylase | HMPREF1064_01189 | Not Available | - | 1327755 - 1328453 | 25753.8 |
| hypothetical protein | HMPREF1064_01190 | Not Available | + | 1328581 - 1329165 | 21446.7 |
| hypothetical protein | HMPREF1064_01191 | Not Available | + | 1329187 - 1330053 | 31386.7 |
| hypothetical protein | HMPREF1064_01192 | Not Available | + | 1330155 - 1330706 | 20449.4 |
| hypothetical protein | HMPREF1064_01193 | Not Available | + | 1330651 - 1331139 | 18416.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
