Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01175 | Not Available | - | 1315765 - 1316046 | 10477.4 |
| hypothetical protein | HMPREF1064_01176 | Not Available | - | 1316062 - 1316214 | 5566.72 |
| hypothetical protein | HMPREF1064_01177 | Not Available | - | 1316292 - 1316618 | 12394.2 |
| hypothetical protein | HMPREF1064_01178 | Not Available | - | 1316632 - 1316886 | 10182.4 |
| hypothetical protein | HMPREF1064_01179 | Not Available | - | 1316906 - 1317166 | 9957.11 |
| transposase for insertion sequence element is21-like | HMPREF1064_01180 | Not Available | + | 1317539 - 1319059 | 59785.3 |
| hypothetical protein | HMPREF1064_01181 | Not Available | + | 1319046 - 1319237 | 7624.4 |
| hypothetical protein | HMPREF1064_01182 | Not Available | + | 1319787 - 1321343 | 60326.8 |
| Trna-leu | Not Available | Not Available | + | 1321309 - 1321392 | Not Available |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF1064_01183 | Not Available | + | 1321577 - 1322620 | 39400.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
