Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01135 | Not Available | + | 1274912 - 1276102 | 45179.7 |
| hypothetical protein | HMPREF1064_01136 | Not Available | + | 1276825 - 1277166 | 13345.0 |
| hypothetical protein | HMPREF1064_01137 | Not Available | + | 1277210 - 1278145 | 36509.4 |
| hypothetical protein | HMPREF1064_01138 | Not Available | + | 1278613 - 1279728 | 44100.6 |
| hypothetical protein | HMPREF1064_01139 | Not Available | + | 1279730 - 1280548 | 31398.6 |
| hypothetical protein | HMPREF1064_01140 | Not Available | + | 1280628 - 1281248 | 23391.5 |
| mate efflux family protein | HMPREF1064_01141 | Not Available | + | 1281450 - 1282787 | 50161.5 |
| hypothetical protein | HMPREF1064_01142 | Not Available | + | 1282800 - 1283435 | 24119.0 |
| hypothetical protein | HMPREF1064_01143 | Not Available | + | 1283438 - 1284283 | 33859.8 |
| hypothetical protein | HMPREF1064_01144 | Not Available | + | 1284500 - 1284859 | 14376.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
