Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00947 | Not Available | - | 1040216 - 1041835 | 61289.0 |
| hypothetical protein | HMPREF1064_00948 | Not Available | + | 1042013 - 1042633 | 23521.8 |
| chaperone dnaj | HMPREF1064_00949 | Not Available | + | 1042653 - 1043828 | 42201.2 |
| folc protein | HMPREF1064_00950 | Not Available | + | 1043923 - 1045209 | 48126.8 |
| hypothetical protein | HMPREF1064_00951 | Not Available | + | 1045304 - 1046398 | 39972.6 |
| hypothetical protein | HMPREF1064_00952 | Not Available | + | 1046445 - 1047785 | 47512.6 |
| galactokinase | HMPREF1064_00953 | Not Available | + | 1047826 - 1048980 | 43009.0 |
| hypothetical protein | HMPREF1064_00954 | Not Available | - | 1048870 - 1049091 | 8867.69 |
| galactose mutarotase | HMPREF1064_00955 | Not Available | + | 1049187 - 1050332 | 41523.1 |
| solute:sodium symporter (sss) family transporter | HMPREF1064_00956 | Not Available | + | 1050359 - 1052101 | 64469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
