Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. KLE 1280 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
484654 bp
Thymine Count
491416 bp
Guanine Count
616244 bp
Cytosine Count
611098 bp
Genome Length
2203412 bp
Protein-coding Genes
1763 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF1121_00019 | Not Available | - | 22058 - 23119 | 40323.4 |
| trna pseudouridine synthase b | HMPREF1121_00020 | Not Available | - | 23137 - 23868 | 27164.8 |
| undecaprenyl-diphosphatase uppp | HMPREF1121_00021 | Not Available | - | 23872 - 24705 | 30542.5 |
| hypothetical protein | HMPREF1121_00022 | Not Available | - | 24705 - 24950 | 8969.36 |
| efflux abc transporter, permease protein | HMPREF1121_00023 | Not Available | - | 24993 - 25871 | 31956.4 |
| carboxynorspermidine decarboxylase | HMPREF1121_00024 | Not Available | + | 26352 - 27491 | 43260.5 |
| ribonucleoside-diphosphate reductase, beta subunit | HMPREF1121_00025 | Not Available | + | 27529 - 28479 | 37443.2 |
| putative ribonucleoside-diphosphate reductase, alpha chain | HMPREF1121_00026 | Not Available | + | 28466 - 30148 | 63083.6 |
| signal recognition particle-docking protein ftsy | HMPREF1121_00027 | Not Available | + | 30182 - 31135 | 34201.3 |
| ribosomal protein s12 methylthiotransferase rimo | HMPREF1121_00028 | Not Available | + | 31132 - 32439 | 49715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
