Polymorphum gilvum SL003B-26A1

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Polymorphum

Description

Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPolymorphum
SpeciesPolymorphum gilvum
StrainSL003B-26A1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Polymorphum gilvum SL003B-26A1

NC_015259.1NC_015258.1

Gene Summary

Adenine Count

762992 bp

Thymine Count

761155 bp

Guanine Count

1582652 bp

Cytosine Count

1542566 bp

Genome Length

4649365 bp

Protein-coding Genes

4239 genes

Non-Coding Genes

199 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3168 domain-containing proteinSL003B_RS14745Not Available-3155151 - 315556714548.6
Dna packaging/head-tail-connectorSL003B_RS14750Not Available-3155886 - 315644319745.6
Major capsid protein precursorSL003B_RS14755Not Available-3156532 - 315783046275.6
Putative prohead proteaseSL003B_RS14760Not Available-3157827 - 315827915811.0
hypothetical proteinSL003B_RS24000Not Available-3158276 - 31583984562.73
hypothetical proteinSL003B_RS14765Not Available-3158556 - 31587507184.68
Portal proteinSL003B_RS14770Not Available-3158747 - 315988640931.6
Terminase large subunitSL003B_RS14775Not Available-3160211 - 316145245275.6
AttlNot AvailableNot Available+4057144 - 4057155Not Available
Site-specific recombinase for integration and excisionSL003B_RS18935Not Available-4068326 - 406965149163.8

Displaying genes 61 – 70 of 4508 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites