Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ef hand | SAMN05444358_101889 | Not Available | - | 860974 - 861759 | 29015.9 |
| l,d-transpeptidase catalytic domain | SAMN05444358_101890 | Not Available | + | 862008 - 862607 | 22195.3 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05444358_101891 | Not Available | - | 862679 - 863155 | 16288.7 |
| predicted o-methyltransferase yrrm | SAMN05444358_101892 | Not Available | - | 863227 - 864093 | 32717.0 |
| carboxylate-amine ligase | SAMN05444358_101893 | Not Available | + | 864213 - 865328 | 42096.5 |
| hypothetical protein | SAMN05444358_101894 | Not Available | - | 865331 - 866191 | 32270.7 |
| hypothetical protein | SAMN05444358_101895 | Not Available | + | 866351 - 867493 | 41229.3 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444358_101896 | Not Available | + | 867501 - 868541 | 38084.4 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444358_101897 | Not Available | + | 868545 - 869417 | 29778.6 |
| hypothetical protein | SAMN05444358_101898 | Not Available | + | 869526 - 869918 | 14074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.