Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease protein | SAMN05444358_101539 | Not Available | - | 518450 - 519598 | 41721.0 |
| leucyl aminopeptidase | SAMN05444358_101540 | Not Available | + | 519770 - 521248 | 52267.8 |
| dna polymerase iii, chi subunit | SAMN05444358_101541 | Not Available | + | 521253 - 521711 | 16702.7 |
| predicted oxidoreductase | SAMN05444358_101542 | Not Available | + | 521742 - 522788 | 38137.3 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05444358_101543 | Not Available | - | 522864 - 523874 | 36430.5 |
| uncharacterized conserved protein, duf849 family | SAMN05444358_101544 | Not Available | + | 523983 - 524906 | 32688.2 |
| carnitine 3-dehydrogenase | SAMN05444358_101545 | Not Available | + | 524935 - 526401 | 53885.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444358_101546 | Not Available | + | 526398 - 527159 | 26461.7 |
| hypothetical protein | SAMN05444358_101547 | Not Available | - | 527161 - 527343 | 6660.72 |
| transcriptional regulator, xre family | SAMN05444358_101548 | Not Available | - | 527420 - 528286 | 32851.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.