Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| von willebrand factor type a domain-containing protein | SAMN05444358_101277 | Not Available | - | 265666 - 267483 | 68191.7 |
| glutamate dehydrogenase (nad(p)+) | SAMN05444358_101278 | Not Available | + | 267810 - 269240 | 52693.9 |
| sarcosine oxidase subunit beta | SAMN05444358_101279 | Not Available | + | 269438 - 270691 | 45744.6 |
| sarcosine oxidase subunit delta | SAMN05444358_101280 | Not Available | + | 270747 - 271010 | 9933.6 |
| sarcosine oxidase subunit alpha | SAMN05444358_101281 | Not Available | + | 271007 - 273940 | 105723.0 |
| sarcosine oxidase subunit gamma | SAMN05444358_101282 | Not Available | + | 273933 - 274478 | 19260.4 |
| hypothetical protein | SAMN05444358_101283 | Not Available | + | 274514 - 274849 | 12685.0 |
| dna primase | SAMN05444358_101284 | Not Available | + | 274851 - 276800 | 72379.3 |
| rna polymerase, sigma 70 subunit, rpod /rna polymerase, sigma 38 subunit, rpos | SAMN05444358_101285 | Not Available | + | 276915 - 278903 | 75542.7 |
| helix-turn-helix domain-containing protein | SAMN05444358_101286 | Not Available | - | 279080 - 280099 | 37911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.