Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05444358_101980 | Not Available | + | 948711 - 949757 | 38518.7 |
| peptide/nickel transport system permease protein | SAMN05444358_101981 | Not Available | + | 949771 - 951234 | 53078.4 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_101982 | Not Available | + | 951328 - 953415 | 76491.6 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444358_101983 | Not Available | - | 953530 - 954516 | 35630.9 |
| dna-binding transcriptional regulator, csgd family | SAMN05444358_101984 | Not Available | - | 954645 - 955607 | 36604.1 |
| transglycosylase slt domain-containing protein | SAMN05444358_101985 | Not Available | - | 955694 - 956272 | 21636.1 |
| single-strand binding protein | SAMN05444358_101986 | Not Available | + | 956479 - 956970 | 17448.2 |
| zn-dependent protease (includes spoivfb) | SAMN05444358_101987 | Not Available | + | 956989 - 958059 | 38248.4 |
| 3-dehydroquinate synthase | SAMN05444358_101988 | Not Available | - | 958069 - 959181 | 39124.1 |
| shikimate kinase | SAMN05444358_101989 | Not Available | - | 959181 - 959768 | 21376.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.