Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05444358_101439 | Not Available | + | 420163 - 421284 | 39759.8 |
| agmatine deiminase | SAMN05444358_101440 | Not Available | - | 421291 - 422361 | 39311.7 |
| protein-disulfide isomerase | SAMN05444358_101441 | Not Available | - | 422384 - 423142 | 27154.1 |
| putative zn-dependent protease, contains tpr repeats | SAMN05444358_101442 | Not Available | - | 423139 - 424500 | 49868.8 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05444358_101443 | Not Available | + | 424523 - 425686 | 42152.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05444358_101444 | Not Available | + | 425753 - 426973 | 44060.4 |
| penicillin-binding protein 1a | SAMN05444358_101445 | Not Available | + | 427069 - 429555 | 91839.9 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN05444358_101446 | Not Available | + | 429644 - 430771 | 41702.4 |
| peptidase m50b-like | SAMN05444358_101447 | Not Available | + | 430772 - 431425 | 23556.6 |
| amidase | SAMN05444358_101448 | Not Available | + | 431596 - 432993 | 49759.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.