Ruegeria halocynthiae

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria halocynthiae is a Gram-negative, rod-shaped bacterium that exhibits optimal growth at a temperature of 29.0°C. This microbe is part of the diverse microbial community found in marine environments, where it may play a role in the complex interactions among marine organisms. The classification as Gram-negative suggests that Ruegeria halocynthiae possesses a thinner peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions within the marine ecosystem. The rod shape of Ruegeria halocynthiae is characteristic of many bacteria, allowing for efficient nutrient uptake and motility in aquatic environments. While specific ecological roles and interactions with other organisms are not detailed, the presence of this bacterium in marine habitats suggests potential involvement in biogeochemical cycles, particularly in processes like nitrogen fixation or organic matter decomposition. In summary, Ruegeria halocynthiae exemplifies a specialized adaptation to marine conditions, thriving optimally at 29.0°C, and its Gram-negative nature and rod morphology likely confer advantages for survival and interaction in its ecological niche. Further studies could elucidate its specific roles and contributions to marine ecosystems, shedding light on its potential importance in maintaining marine biodiversity and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria halocynthiae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria halocynthiae

Accession NumberFNNP00000000.1

Gene Summary

Adenine Count

921858 bp

Thymine Count

924279 bp

Guanine Count

1199491 bp

Cytosine Count

1198040 bp

Genome Length

4243668 bp

Protein-coding Genes

4188 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
amino acid abc transporter membrane protein 2, paat familySAMN05444358_11443Not Available+4007138 - 400792629709.5
lsu ribosomal protein l36pSAMN05444358_11444Not Available-4008008 - 40081335012.31
Trna-valNot AvailableNot Available+4008224 - 4008298Not Available
n-formylglutamate deformylaseSAMN05444358_11446Not Available+4008448 - 400932031751.8
dna polymerase-4SAMN05444358_11447Not Available-4009322 - 401057546104.7
8-oxo-dgtp diphosphataseSAMN05444358_11448Not Available+4010667 - 401106514980.9
orotidine-5'-phosphate decarboxylaseSAMN05444358_11449Not Available-4011329 - 401203324451.4
hypothetical proteinSAMN05444358_11450Not Available+4012173 - 401249611245.1
hypothetical proteinSAMN05444358_11451Not Available-4012493 - 401305020870.2
atp-dependent clp protease atp-binding subunit clpbSAMN05444358_11452Not Available+4013266 - 401588495548.3

Displaying genes 4031 – 4040 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites