Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ca2+-binding protein, rtx toxin-related | SAMN05444358_11370 | Not Available | - | 3946909 - 3950208 | 113252.0 |
| hypothetical protein | SAMN05444358_11371 | Not Available | - | 3950307 - 3950714 | 15068.0 |
| arac-type dna-binding protein | SAMN05444358_11372 | Not Available | + | 3951305 - 3952318 | 38558.6 |
| transposase, is5 family | SAMN05444358_11373 | Not Available | + | 3952422 - 3952769 | 13108.0 |
| transposase, is4 family | SAMN05444358_11374 | Not Available | + | 3952790 - 3953179 | 15084.5 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_11375 | Not Available | - | 3953394 - 3955205 | 66227.4 |
| acetamidase/formamidase | SAMN05444358_11376 | Not Available | - | 3955202 - 3956146 | 33490.8 |
| peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein | SAMN05444358_11377 | Not Available | - | 3956146 - 3957771 | 58481.9 |
| peptide/nickel transport system permease protein | SAMN05444358_11378 | Not Available | - | 3957816 - 3958736 | 33520.2 |
| peptide/nickel transport system permease protein | SAMN05444358_11379 | Not Available | - | 3958736 - 3959632 | 32246.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.