Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer | SAMN05444358_11350 | Not Available | - | 3928769 - 3929251 | 17784.6 |
| type iv secretion system protein vird4 | SAMN05444358_11351 | Not Available | - | 3929267 - 3929518 | 9215.98 |
| replication protein c c-terminal region | SAMN05444358_11352 | Not Available | + | 3929842 - 3930195 | 12740.2 |
| dna-binding transcriptional regulator, csgd family | SAMN05444358_11353 | Not Available | + | 3930381 - 3931334 | 35289.0 |
| glutathione s-transferase | SAMN05444358_11354 | Not Available | + | 3931399 - 3932136 | 27914.9 |
| choline dehydrogenase | SAMN05444358_11355 | Not Available | - | 3932133 - 3933710 | 56633.9 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05444358_11356 | Not Available | - | 3933753 - 3934304 | 20456.3 |
| antibiotic biosynthesis monooxygenase | SAMN05444358_11357 | Not Available | - | 3934595 - 3934957 | 13287.8 |
| dj-1/pfpi family protein | SAMN05444358_11358 | Not Available | + | 3935147 - 3935716 | 19610.1 |
| hlyd family secretion protein | SAMN05444358_11359 | Not Available | - | 3935945 - 3936721 | 28995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.