Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdpmannose 4,6-dehydratase | SAMN05444358_11055 | Not Available | - | 3617449 - 3618573 | 42023.6 |
| hth dna binding domain-containing protein | SAMN05444358_11056 | Not Available | - | 3618679 - 3619758 | 38873.1 |
| hypothetical protein | SAMN05444358_11057 | Not Available | - | 3619818 - 3620555 | 25950.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444358_11058 | Not Available | - | 3620552 - 3621076 | 19415.3 |
| hypothetical protein | SAMN05444358_11059 | Not Available | + | 3621175 - 3621756 | 20883.9 |
| proline racemase | SAMN05444358_11060 | Not Available | - | 3621795 - 3622817 | 36668.3 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444358_11061 | Not Available | - | 3622882 - 3623940 | 38615.6 |
| transcriptional regulator, iclr family | SAMN05444358_11062 | Not Available | - | 3623937 - 3624731 | 29298.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444358_11063 | Not Available | + | 3624872 - 3626131 | 46996.8 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444358_11064 | Not Available | + | 3626226 - 3627152 | 35483.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.