Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444358_10975 | Not Available | - | 3517907 - 3519226 | 46755.1 |
| hypothetical protein nrea | SAMN05444358_10976 | Not Available | - | 3519230 - 3519487 | 9586.4 |
| ribonuclease d | SAMN05444358_10977 | Not Available | + | 3519621 - 3520235 | 22707.2 |
| arabinose-5-phosphate isomerase | SAMN05444358_10978 | Not Available | + | 3520232 - 3521194 | 33816.2 |
| lipopolysaccharide export system protein lptc | SAMN05444358_10979 | Not Available | + | 3521199 - 3521807 | 21818.0 |
| lipopolysaccharide export system protein lpta | SAMN05444358_10980 | Not Available | + | 3521889 - 3522302 | 14515.2 |
| lipopolysaccharide export system atp-binding protein | SAMN05444358_10981 | Not Available | + | 3522302 - 3523060 | 28150.1 |
| sigma 54 modulation protein /ssu ribosomal protein s30p | SAMN05444358_10982 | Not Available | + | 3523313 - 3523876 | 20805.5 |
| pts iia-like nitrogen-regulatory protein ptsn | SAMN05444358_10983 | Not Available | + | 3523936 - 3524400 | 16417.9 |
| hypothetical protein | SAMN05444358_10984 | Not Available | + | 3524406 - 3524522 | 4298.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.