Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria halocynthiae
Accession NumberFNNP00000000.1
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444358_10925 | Not Available | - | 3475418 - 3476311 | 32487.2 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444358_10926 | Not Available | + | 3476394 - 3477299 | 34001.4 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05444358_10927 | Not Available | - | 3477322 - 3478344 | 37161.0 |
| hypothetical protein | SAMN05444358_10928 | Not Available | - | 3478341 - 3479366 | 37048.8 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05444358_10929 | Not Available | - | 3479502 - 3480107 | 22718.1 |
| uncharacterized membrane protein hded, duf308 family | SAMN05444358_10930 | Not Available | - | 3480150 - 3480695 | 19137.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444358_10931 | Not Available | - | 3480734 - 3482137 | 50449.1 |
| mechanosensitive ion channel | SAMN05444358_10932 | Not Available | + | 3482374 - 3483741 | 50684.2 |
| ribosome-associated protein | SAMN05444358_10933 | Not Available | + | 3483906 - 3484265 | 13209.7 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05444358_10934 | Not Available | + | 3484310 - 3484780 | 16948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.