Lacinutrix sp. 5H-3-7-4

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lacinutrix

Description

Lacinutrix sp. 5H-3-7-4.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLacinutrix
SpeciesLacinutrix sp. 5H-3-7-4
Strain5H-3-7-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacinutrix sp. 5H-3-7-4

NC_015638.1

Gene Summary

Adenine Count

1151995 bp

Thymine Count

1128188 bp

Guanine Count

509719 bp

Cytosine Count

506266 bp

Genome Length

3296168 bp

Protein-coding Genes

2967 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaLACAL_RS00010Not Available+13 - 144054185.2
low molecular weight protein-tyrosine-phosphataseLACAL_RS00015Not Available+1453 - 191117008.3
pqq-dependent sugar dehydrogenaseLACAL_RS00020Not Available+1964 - 336751053.6
sam-dependent methyltransferaseLACAL_RS00025Not Available+3368 - 408426684.4
hypothetical proteinLACAL_RS00030Not Available-4089 - 477525656.2
duf2279 domain-containing proteinLACAL_RS00035Not Available-4886 - 579434355.9
endolytic transglycosylase mltgLACAL_RS00040Not Available-5794 - 683739888.1
gnat family n-acetyltransferaseLACAL_RS00045Not Available-6837 - 735820393.4
diaminopimelate epimeraseLACAL_RS00050Not Available-7352 - 813128612.7
trypsin-like peptidase domain-containing proteinLACAL_RS00055Not Available+8269 - 967250579.2

Displaying genes 1 – 10 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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