Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria conchae str. DSM 29317
Accession NumberRCCT00000000.1
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | CLV75_3777 | Not Available | + | 3769838 - 3770548 | 26049.9 |
| hypothetical protein | CLV75_3778 | Not Available | - | 3770594 - 3771028 | 16249.3 |
| arac family transcriptional regulator of adaptative response/methylated-dna-[protein]-cysteine methyltransferase | CLV75_3779 | Not Available | - | 3771205 - 3772056 | 31384.7 |
| marr family protein | CLV75_3780 | Not Available | + | 3772156 - 3772626 | 17297.9 |
| nicotinamidase-related amidase | CLV75_3781 | Not Available | + | 3772628 - 3773269 | 23202.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | CLV75_3782 | Not Available | + | 3773366 - 3774010 | 24156.2 |
| sugar/nucleoside kinase (ribokinase family) | CLV75_3783 | Not Available | + | 3774007 - 3774996 | 35124.7 |
| merr family transcriptional regulator | CLV75_3784 | Not Available | - | 3775010 - 3775399 | 14543.4 |
| hypothetical protein | CLV75_3785 | Not Available | + | 3775489 - 3775812 | 11646.7 |
| hypothetical protein | CLV75_3786 | Not Available | + | 3775889 - 3776035 | 5172.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.