Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligosaccharide flippase family protein | ECHVI_RS04595 | Not Available | - | 1095455 - 1096753 | 47878.8 |
| hypothetical protein | ECHVI_RS04600 | Not Available | - | 1096805 - 1097884 | 40741.0 |
| slbb domain-containing protein | ECHVI_RS04605 | Not Available | - | 1097884 - 1100493 | 95890.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS04610 | Not Available | - | 1100884 - 1102380 | 55810.5 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS04615 | Not Available | - | 1102393 - 1105557 | 116137.0 |
| radical sam/spasm domain-containing protein | ECHVI_RS04620 | Not Available | - | 1105997 - 1107016 | 38627.1 |
| hypothetical protein | ECHVI_RS04625 | Not Available | - | 1107079 - 1107612 | 19992.6 |
| duf4221 family protein | ECHVI_RS04630 | Not Available | - | 1107665 - 1108801 | 43552.3 |
| rna methyltransferase | ECHVI_RS04635 | Not Available | - | 1109439 - 1109987 | 19941.9 |
| dna mismatch repair protein muts | ECHVI_RS04640 | Not Available | + | 1110077 - 1112686 | 98195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.