Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | ECHVI_RS04200 | Not Available | + | 991863 - 992909 | 37395.6 |
| hisa/hisf-related tim barrel protein | ECHVI_RS04205 | Not Available | + | 993104 - 993850 | 27853.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | ECHVI_RS04210 | Not Available | - | 994019 - 995077 | 39116.4 |
| dipeptide epimerase | ECHVI_RS04215 | Not Available | - | 995174 - 996184 | 37534.6 |
| m14 metallopeptidase family protein | ECHVI_RS04220 | Not Available | + | 996455 - 997948 | 55589.1 |
| ydei/ompd-associated family protein | ECHVI_RS04225 | Not Available | + | 998168 - 998764 | 22768.5 |
| duf4256 domain-containing protein | ECHVI_RS04230 | Not Available | + | 998812 - 999375 | 21184.1 |
| cytochrome c biogenesis protein ccsa | ECHVI_RS04235 | Not Available | - | 999376 - 1002489 | 118977.0 |
| ammonia-forming cytochrome c nitrite reductase | ECHVI_RS04240 | Not Available | - | 1002548 - 1004041 | 56488.5 |
| cytochrome c nitrite reductase small subunit | ECHVI_RS04245 | Not Available | - | 1004046 - 1004696 | 25017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.