Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | ECHVI_RS03990 | Not Available | + | 940271 - 941956 | 65000.5 |
| trna epoxyqueuosine(34) reductase queg | ECHVI_RS03995 | Not Available | - | 941965 - 942915 | 36063.1 |
| holliday junction branch migration dna helicase ruvb | ECHVI_RS04000 | Not Available | - | 942970 - 944007 | 38083.4 |
| 30s ribosomal protein s21 | ECHVI_RS04005 | Not Available | + | 944194 - 944388 | 7717.42 |
| tyrosine-type recombinase/integrase | ECHVI_RS04010 | Not Available | + | 944443 - 945327 | 34032.1 |
| ribosome hibernation-promoting factor, hpf/yfia family | ECHVI_RS04015 | Not Available | + | 945359 - 945664 | 11875.4 |
| phosphatase pap2 family protein | ECHVI_RS04020 | Not Available | + | 945802 - 946518 | 27291.5 |
| arnt family glycosyltransferase | ECHVI_RS04025 | Not Available | + | 946710 - 948221 | 58318.5 |
| hypothetical protein | ECHVI_RS04030 | Not Available | - | 948240 - 948746 | 18862.7 |
| duf4919 domain-containing protein | ECHVI_RS04035 | Not Available | - | 948757 - 949452 | 26675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.