Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | ECHVI_RS03350 | Not Available | - | 779393 - 781570 | 82026.4 |
| hypothetical protein | ECHVI_RS03355 | Not Available | + | 781799 - 782032 | 7651.15 |
| d-alanine--d-alanine ligase | ECHVI_RS03360 | Not Available | + | 782321 - 783310 | 36738.9 |
| methionine adenosyltransferase | ECHVI_RS03365 | Not Available | - | 783514 - 784767 | 46079.8 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | ECHVI_RS03375 | Not Available | - | 785209 - 786252 | 39959.3 |
| galactokinase | ECHVI_RS03380 | Not Available | - | 786406 - 787557 | 42216.3 |
| aldose epimerase family protein | ECHVI_RS03385 | Not Available | - | 787573 - 788652 | 39073.9 |
| laci family dna-binding transcriptional regulator | ECHVI_RS03390 | Not Available | - | 788784 - 789800 | 37560.6 |
| is110 family transposase | ECHVI_RS03395 | Not Available | + | 790478 - 791467 | 37696.0 |
| m28 family peptidase | ECHVI_RS03400 | Not Available | - | 791960 - 792946 | 36438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.