Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | ECHVI_RS19355 | Not Available | + | 4767591 - 4768166 | 21976.7 |
| serine hydrolase | ECHVI_RS19360 | Not Available | - | 4768501 - 4769412 | 33064.2 |
| rna polymerase sigma factor | ECHVI_RS19365 | Not Available | - | 4769473 - 4770078 | 23535.3 |
| alpha-l-rhamnosidase | ECHVI_RS19370 | Not Available | - | 4770309 - 4772957 | 99204.8 |
| rok family protein | ECHVI_RS19375 | Not Available | - | 4773080 - 4773955 | 31627.7 |
| gh92 family glycosyl hydrolase | ECHVI_RS19380 | Not Available | - | 4773962 - 4776124 | 80917.2 |
| glycoside hydrolase family 125 protein | ECHVI_RS19385 | Not Available | - | 4776341 - 4777705 | 51487.7 |
| glycoside hydrolase family 76 protein | ECHVI_RS19390 | Not Available | - | 4778059 - 4779216 | 43314.9 |
| suse domain-containing protein | ECHVI_RS19395 | Not Available | - | 4779403 - 4780530 | 42148.7 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS19400 | Not Available | - | 4780563 - 4782194 | 61627.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.