Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vape domain-containing protein | ECHVI_RS17090 | Not Available | + | 4162818 - 4164032 | 47045.6 |
| toprim domain-containing protein | ECHVI_RS17095 | Not Available | + | 4164249 - 4165112 | 32804.1 |
| plasmid mobilization relaxosome protein mobc | ECHVI_RS17100 | Not Available | + | 4165214 - 4165558 | 13119.2 |
| relaxase/mobilization nuclease domain-containing protein | ECHVI_RS17105 | Not Available | + | 4165548 - 4166723 | 43368.9 |
| hypothetical protein | ECHVI_RS17110 | Not Available | - | 4166731 - 4167150 | 15755.9 |
| helix-turn-helix domain-containing protein | ECHVI_RS17115 | Not Available | - | 4167716 - 4168141 | 16629.8 |
| m57 family metalloprotease | ECHVI_RS23050 | Not Available | + | 4168478 - 4169770 | 48555.3 |
| class i sam-dependent methyltransferase | ECHVI_RS17125 | Not Available | + | 4169945 - 4170877 | 36864.7 |
| endonuclease/exonuclease/phosphatase family protein | ECHVI_RS17135 | Not Available | - | 4171839 - 4172612 | 28822.5 |
| endonuclease/exonuclease/phosphatase family protein | ECHVI_RS17140 | Not Available | - | 4172687 - 4173463 | 29022.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.