Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS13460 | Not Available | + | 3292965 - 3296090 | 118297.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS13465 | Not Available | + | 3296104 - 3297969 | 70177.0 |
| duf3823 domain-containing protein | ECHVI_RS13470 | Not Available | + | 3297987 - 3298691 | 25683.5 |
| family 43 glycosylhydrolase | ECHVI_RS13475 | Not Available | + | 3298960 - 3299982 | 37674.5 |
| hypothetical protein | ECHVI_RS13480 | Not Available | + | 3300011 - 3302098 | 78784.1 |
| duf4964 domain-containing protein | ECHVI_RS13485 | Not Available | + | 3302288 - 3303091 | 29761.8 |
| is982 family transposase | ECHVI_RS13490 | Not Available | + | 3303311 - 3304207 | 34683.9 |
| glutaminase domain-containing protein | ECHVI_RS13495 | Not Available | + | 3304222 - 3305958 | 64691.1 |
| beta-l-arabinofuranosidase domain-containing protein | ECHVI_RS13500 | Not Available | + | 3306020 - 3308149 | 80791.1 |
| glycoside hydrolase family 2 protein | ECHVI_RS13505 | Not Available | + | 3308192 - 3310024 | 69205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.