Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | ECHVI_RS13155 | Not Available | - | 3208847 - 3211975 | 119246.0 |
| amidohydrolase family protein | ECHVI_RS13165 | Not Available | - | 3212236 - 3213672 | 52666.2 |
| acyl-coa thioesterase | ECHVI_RS13170 | Not Available | - | 3213994 - 3214392 | 15166.4 |
| pectate lyase | ECHVI_RS13175 | Not Available | + | 3214675 - 3216204 | 55011.2 |
| gtp-binding protein | ECHVI_RS13180 | Not Available | - | 3216416 - 3217612 | 45264.7 |
| merc domain-containing protein | ECHVI_RS13185 | Not Available | - | 3217615 - 3218004 | 14075.6 |
| abc transporter atp-binding protein | ECHVI_RS13190 | Not Available | + | 3218129 - 3218752 | 22744.8 |
| abc transporter permease | ECHVI_RS13195 | Not Available | + | 3218749 - 3220035 | 46753.2 |
| duf3299 domain-containing protein | ECHVI_RS13200 | Not Available | + | 3220028 - 3220459 | 16475.6 |
| sulfatase | ECHVI_RS13205 | Not Available | + | 3220620 - 3222095 | 54991.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.